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<article language="en">
	<journal>
		<journal_title>Ocean Science</journal_title>
		<journal_url>www.ocean-sci.net</journal_url>
		<issn>1812-0784</issn>
		<eissn>1812-0792</eissn>
		<volume_number>4</volume_number>
		<issue_number>3</issue_number>
		<publication_year>2008</publication_year>
	</journal>
	<doi>10.5194/os-4-183-2008</doi>
	<article_url>http://www.ocean-sci.net/4/183/2008/</article_url>
	<abstract_html>http://www.ocean-sci.net/4/183/2008/os-4-183-2008.html</abstract_html>
	<fulltext_pdf>http://www.ocean-sci.net/4/183/2008/os-4-183-2008.pdf</fulltext_pdf>
	<start_page>183</start_page>
	<end_page>198</end_page>
	<publication_date>2008-07-28</publication_date>
	<article_title content_type="html">On the Indonesian Throughflow in the OCCAM 1/4 degree ocean model</article_title>
	<authors>
		<author numeration="1" affiliations="1">
			<name>U. W. Humphries</name>
		</author>
		<author numeration="2" affiliations="2">
			<name>D. J. Webb</name>
			<email>david.webb@noc.soton.ac.uk</email>
		</author>
	</authors>
	<affiliations>
		<affiliation numeration="1" content_type="html">King Monghut&apos;s Institute of Technology, Thailand</affiliation>
		<affiliation numeration="2" content_type="html">National Oceanography Centre, Southampton SO14 3ZH, UK</affiliation>
	</affiliations>
	<abstract content_type="html">The Indonesian Throughflow is analysed in two runs of the OCCAM 1/4 degree
global ocean model, one using monthly climatological winds and one using
ECMWF analysed six-hourly winds for the period 1993 to 1998. The long-term
model throughflow agrees with observations and the value predicted by
Godfrey&apos;s Island Rule. The Island Rule has some skill in predicting the
annual signal each year but is poor at predicting year to year and shorter
term variations in the total flow, especially in El Niño years.

&lt;br&gt;&lt;br&gt;
The spectra of transports in individual passages show significant differences
between those connecting the region to the Pacific Ocean and those connecting
with the Indian Ocean. On investigation we found that changes in the northern
transports were strongly correlated with changes in the position of currents
in the Celebes Sea and off Halmahera. Vertical profiles of transport are in
reasonable agreement with observations but the model overestimates the near
surface transport through the Lombok Strait and the dense overflow from the
Pacific through the Lifamatola Strait into the deep Banda Sea. In both cases
the crude representation of the passages by the model appears responsible.

&lt;br&gt;&lt;br&gt;
In the north the model shows, as expected, that the largest transport is via
the Makassar Strait. However this is less than expected and instead there is
significant flow via the Halmahera Sea. If Godfrey&apos;s Island Rule is correct
and the throughflow is forced by the northward flow between Australia and
South America, then the Halmahers Sea route should be important. It is the
most southerly route around New Guinea to the Indian Ocean and there is no
apparent reason why the flow should go further north in order to pass through
the Makassar Strait. The model result thus raises the question of why in
reality the Makassar Strait route appears to dominate the throughflow.</abstract>
	<references>
		<reference numeration="1" content_type="text"> Arakawa, A.: Computational design for long-term numerical integration of the equations of fluid motion: Two-dimensional incompressible flow, J. Comput. Phys., 1, 119–143, 1966. </reference>
		<reference numeration="2" content_type="text"> Arief, D. and Murray, S. P: Low-frequency fluctuations in the Indonesian Throughflow through Lombok Strait, J. Geophys. Res., 101(C5), 12 455–12 464, 1996. </reference>
		<reference numeration="3" content_type="text"> Armi, L. and Williams, R.: The hydraulics of a stratified fluid flowing through a contraction, J. Fluid Mech., 251, 355–375, 1993. </reference>
		<reference numeration="4" content_type="text"> Bryan, K.: A numerical method for the study of the circulation of the world ocean, J. Comput. Phys., 4, 347–376, 1969. </reference>
		<reference numeration="5" content_type="text"> Bryden, H. L. and Beal, L. M.: Role of the Agulhas current in Indian ocean circulation and associated heat and freshwater fluxes, Deep-Sea Res., 48, 1821–1845, 2001. </reference>
		<reference numeration="6" content_type="text"> Cox, M. D.: A primitive equation 3-dimensional model of the ocean. Tech.Rep. 1, Geophysical Fluid Dyn. Lab, Natl. Oceanic and Atmos. Admin., Princeton Uni. Press, Princeton, N.J., 1984. </reference>
		<reference numeration="7" content_type="text"> Cresswell, G., Frische, A., Peterson J., and Quadfasel, D.: Circulation in the Timor Sea, J. Geophys. Res., 98, 14 379–14 389, 1993. </reference>
		<reference numeration="8" content_type="text"> Cresswell, G. R. and Luick J. L.: Current measurements in the Halmahera sea, J. Geophys. Res., 106, 13 945–13 951, 2001. </reference>
		<reference numeration="9" content_type="text"> Fieux, M., Molcard, R., and Ilahude, A. G.: Geostrophic transport of the Pacific-Indian Ocean throughflow, J. Geophys. Res., 101(C5), 12 421–12 432, 1996. </reference>
		<reference numeration="10" content_type="text"> Godfrey, J. S.: A Sverdrup model of the depth-integrated flow for the world ocean allowing for Island circulations, Geophys. Astro. Fluid, 45, 89–112, 1989. </reference>
		<reference numeration="11" content_type="text"> Godfrey, J. S.: The effect of the Indonesian Throughflow on ocean circulation and heat exchange with the atmosphere: A review, J. Geophys. Res., 101(C5), 12 217–12 237, 1996. </reference>
		<reference numeration="12" content_type="text"> Gordon, A. L.: Oceanography of the Indonesian Seas and their Throughflow, Oceanography, 18(4), 14–27, 2005. %</reference>
		<reference numeration="13" content_type="text"> %Gordon, A.L. and Susanto, R.D.: Makassar strait transport: Initial estimate based on arlindo results. Marine Technology Society Journal, 32, 34-45, 1998. </reference>
		<reference numeration="14" content_type="text"> Gordon, A. L., Susanto, R. D., and Ffield, A.: Throughflow within Makassar Strait, Geophys. Res. Lett., 26, 3325–3328, 1999. </reference>
		<reference numeration="15" content_type="text"> Griffies, S. M., Gnanadesikan, A., Dixon, K. W., Dunne, J. P., Gerdes, R., Harrison, M. J., Rosati, A., Russell, J. L., Samuels, B. L., Spelman, M. J., Winton, M., and Zhang, R.: Formulation of an ocean model for global climate simulations, Ocean Sci., 1, 45–79, 2005. </reference>
		<reference numeration="16" content_type="text"> Hellerman, S. and Rosenstein, M.: Normal monthly wind stress over the world ocean with error estimates, J. Phys. Oceanogr., 13, 1093–1104, 1983. </reference>
		<reference numeration="17" content_type="text"> Lee, T., Giering, R., and Cheng, B.: Adjoint sensitivity of Indonesian throughflow transport to wind stress: application to interannual variability, Jet Propulsion Laboratory Publication 01-11, 36 pp., 2001. </reference>
		<reference numeration="18" content_type="text"> Levitus, S.: Climatological atlas of the world ocean, NOAA Professional Paper No. 13, GFDL, Princeton University, NJ, 1982. </reference>
		<reference numeration="19" content_type="text"> Levitus, S. and Boyer, T. P.: World Ocean Atlas 1994, NOAA Atlas NESDIS, Vol. 4, Temperature, 117 pp., 1994a. </reference>
		<reference numeration="20" content_type="text"> Levitus, S., Burgett, R., and Boyer, T. P.: World Ocean Atlas 1994, NOAA Atlas NESDIS, Vol. 3, Salinity, 99 pp., 1994b. %</reference>
		<reference numeration="21" content_type="text"> %McCreary, J. P. and Lu, P.: Influence of the Indonesian Throughflow on the circulation of Pacific intermediate water. Journal of Physical Oceanography, 31, 932-942, 2001. </reference>
		<reference numeration="22" content_type="text"> Molcard, R., Ilahude, A. G., Fieux, M., Swallow, J. C., and Banjarnahor, J.: Low frequency variability of the currents in Indonesian Channels (Savu-Roti M1 and Roti-Ashmore Reef M2), Deep Sea Res., 41, 1643–1662, 1994. </reference>
		<reference numeration="23" content_type="text"> Molcard, R., Fieux, M., and Ilahude, A. G.: The Indo-Pacific Throughflow in the Timor Passage, J. Geophys. Res., 101, 12 411–12 420, 1996. </reference>
		<reference numeration="24" content_type="text"> Molcard, R., Fieux, M., and Syamsudin, F.: The Throughflow within Ombai strait, Deep-Sea Res., 48(5), 1237–1253, 2001. </reference>
		<reference numeration="25" content_type="text"> Murray, S. P. and Arief, D.: Throughflow into the Indian Ocean through the Lombok Strait, January 1985–January 1986, Nature, 333, 444–447, 1988. </reference>
		<reference numeration="26" content_type="text"> Murray, S. P., Arief, D., Kindle, J. C., and Hurlburt, H. E.: Characteristics of circulation in an Indonesian Archipelago Strait from hydrography, current measurements and modelling results, in: The Physical Oceanography of Sea Straits, edited by: Pratt, L., Kluwer Academic Publishers, Norwell, MA, 3–23, 1990. </reference>
		<reference numeration="27" content_type="text"> Meyers, G.: Variation of Indonesian throughflow and the El Niño-Southern Oscillation, J. Geophys. Res., 101, 12 255–12 263, 1996. </reference>
		<reference numeration="28" content_type="text"> Pacanowski, R. C. and Philander, S. G. H.: Parameterization of vertical mixing in numerical models of tropical oceans, J. Phys. Oceanogr., 11, 1443–1051, 1981. </reference>
		<reference numeration="29" content_type="text"> Pirani, A.: Testing Godfrey&apos;s Island Rule using the OCCAM model for the calculation of the Indonesian Throughflow, MSc Thesis, University of Southampton, 1999. </reference>
		<reference numeration="30" content_type="text"> Qu, Tangdong: Upper-Layer Circulation in the South China Sea, J. Phys. Oceanogr., 30, 1450–1460, 2000. </reference>
		<reference numeration="31" content_type="text"> Qu, Tangdong, Yan, Du, Meyers, G., Ishida, Akio, and Wang Dongxiao: Connecting the tropical Pacific with Indian Ocean through South China Sea. Geophys. Res. Lett., 32, L24609, doi:10.1029/2005GL024698, 2005. %</reference>
		<reference numeration="32" content_type="text"> %Schneider, N., Barnett, TP.: Indonesian Throughflow in a coupled general circulation model. Journal of Geophysical Research, 102(C6), 12341-12358, 1997. </reference>
		<reference numeration="33" content_type="text"> Semtner, A. J.: An oceanic general circulation model with bottom topography. Technical Report No. 9, Dept. of Meteorology, UCLA, Los Angeles, CA 90095, 1974. </reference>
		<reference numeration="34" content_type="text"> Siefridt, L. and Barnier, B.: Banque de Donnes AVIS Vent/flux: Climatologie des Analyses de Surface du CEPMMT, ORSTOM Report 91 1430 025, Toulouse, 1993. %</reference>
		<reference numeration="35" content_type="text"> %Susanto, R.D., Gordon, A.L., and Zheng, Q.N.: Upwelling along the coasts of Java and Sumatra and its relation to ENSO. Geophysical Research Letters, 28, 1599-1602, 2001. </reference>
		<reference numeration="36" content_type="text"> Susanto, R. D. and Gordon, A. L.: Velocity and transport of the Makassar Strait throughflow, J. Geophys. Res., 110, C01005, doi:10.1029/2004JC002425, 2005. </reference>
		<reference numeration="37" content_type="text"> Thompson, S. R.: Sills of the global ocean: a compilation, Ocean Model., 109, 7–9, 1995. </reference>
		<reference numeration="38" content_type="text"> Tozuka, Tomoki, Qu, Tangdong, and Yamagata, Toshio: Dramatic impact of the South China Sea on the Indonesian Throughflow, Geophys. Res. Lett., 34, L12612, doi:10.1029/2007GL030420, 2007. </reference>
		<reference numeration="39" content_type="text"> U.S. Naval Oceanographic Office and the U.S. Naval Ocean Research and Development Activity: DBDB5 (Digital Bathymetric Data Base-5 Minute Grid), U.S.N.O.O., Bay St. Louis, 1983. </reference>
		<reference numeration="40" content_type="text"> van Aken, H. M., Punjanan, J., and Saimima, S.: Physical aspects of the flushing of the East Indonesian basins, Neth. J. Sea Res., 22, 315–339, 1988. </reference>
		<reference numeration="41" content_type="text"> van Aken, H. M., Van Bennekom, A. J., Mook, W. G., and Postma, H.: Application of Munk’s abyssal recipes to tracer distributions in the deep waters of the southern Banda basin, Oceanologica Acta, 14(2), 151–162, 1991. </reference>
		<reference numeration="42" content_type="text"> Wajsowicz, R. C.: The circulation of the depth-integrated flow around an island with application to the Indonesian Throughflow, J. Phys. Oceanogr., 23, 1470–1484, 1993. </reference>
		<reference numeration="43" content_type="text"> Wajsowicz, R. C., Gordon, A. L., Ffield, A., and Susanto, R. D.: Estimating Transport in Makasar Strait, Deep-Sea Res. II, 50, 2163–2181, 2003. </reference>
		<reference numeration="44" content_type="text"> Webb, D. J.: A simple model of the effect of the Kerguelen Plateau on the strength of the Antarctic Circumpolar Current, Geophys. Astro. Fluid, 70, 57–84, 1993. </reference>
		<reference numeration="45" content_type="text"> Webb, D. J.: The vertical advection of momentum in Bryan-Cox-Semtner ocean general circulation models, J. Phys. Oceanogr., 25(12), 3186–3195, 1995. </reference>
		<reference numeration="46" content_type="text"> Webb, D. J., de Cuevas, B., and Richmond, C.: Improved advection schemes for ocean models, J. Atmos. Ocean. Tech., 15, 1171–1187, 1998a. </reference>
		<reference numeration="47" content_type="text"> Webb, D. J., de Cuevas, B. A., and Coward, A. C.: The first main run of the OCCAM global ocean model, Internal Report of James Rennell Divesion, Southampton Oceanography Centre, UK., 1998b. </reference>
		<reference numeration="48" content_type="text"> Wolanski, E., Ridd, P., and Inoue, M.: Currents through Torres Strait, J. Phys. Oceanogr., 18, 1535–1545, 1988. </reference>
		<reference numeration="49" content_type="text"> Wyrtki, K.: NAGA Report, Vol. 2, Scientific results of marine investigations of the South China sea and the Gulf of Thailand 1959–1961, Physical Oceanography of the Southeast Asian Water, Scripps Institution of Oceanography, 195 pp., 1961. </reference>
	</references>
</article>

